PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g129280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 261aa    MW: 28551.4 Da    PI: 8.4443
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g129280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.72.4e-33101159159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK vk+s++prsYYrCt+  C vkk+vers++dp++v++tYeg+H+h+
  Pd.00g129280.m01 101 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVACGVKKRVERSSDDPSTVVTTYEGQHTHP 159
                       59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MLGTVPSTVA LPEKESTTSE VLNGSTAPTT PNSSSISSSS NEAAANKNED QTTTKARDEE  60
ADEQNQDPEK TQKQLKPKKK NQKRQREPRF AFMTKSEVDN LDDGYRWRKY GQKAVKNSPY  120
PRSYYRCTTV ACGVKKRVER SSDDPSTVVT TYEGQHTHPS PITPRGTMGI APLPDQPCAF  180
SSSPFGVQHS APSLNISSPA YGGGAFNPSS FSTGLLQERY NFGSPSSSSS AASNLLRDHG  240
LLQDIVPQIR KEAKEEDHLH Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.13e-54WRKY family protein