PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1292270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 108aa    MW: 11247.4 Da    PI: 4.3431
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1292270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.84.3e-124883137
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                       +g+W++eEd +l ++v ++G ++W++Iar +  gR++
  Pd.00g1292270.m01 48 KGPWSPEEDAILSRLVSKFGARNWSLIARGID-GRSA 83
                       79******************************.**96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MEREMEAAYD AAAEAEVEDS GDSGEEATQA VAGGGGESHR KSGRDRVKGP WSPEEDAILS  60
RLVSKFGARN WSLIARGIDG RSASLAASDG VISSTPPLSA SPLLVYIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.15e-15MYB family protein