PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1291220.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 748aa    MW: 83920.4 Da    PI: 6.8462
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1291220.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.15.3e-1163757461374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++++ +L+arla+++s++ykal +++ts    ++ l+a++l+  +sP+ k
  Pd.00g1291220.m01 375 LRTLLISCAQAVAADDHRSANELLKKVRQHSSPFGDGTQRLAHCLADGLEARLAGTGSQIYKALVSKRTS---AADFLKAHHLYLAASPFKK 463
                        6789*************************************************************99999...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        +s+++ N++I++ +++++rvH+iDf+i +G+QWp+L+q ++ R++gpp+lRiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n+ +
  Pd.00g1291220.m01 464 ISNFVSNKTIMNLAQNATRVHVIDFGILYGFQWPTLIQRISWRDGGPPRLRITGIEFPQPGfrPAERVEETGHRLAAYAEKFNVPFEYNA-I 554
                        ************************************************************9*****************************.7 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        ak++++++leeL+++++E+l+Vn+ ++ ++lldesv+++s+r++vL+l+++++P+++++   +   n++ F++rf eal ++s+lfd+le+ 
  Pd.00g1291220.m01 555 AKNWDTIKLEELKIDRDEVLVVNFLYRGKNLLDESVAVDSPRNRVLDLIRRINPDLFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLETV 646
                        ******************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        +pre++er+ +E e++gre+ nv+aceg er+er et+++W+ r  +aGF ++pl+   +k a   +r  + + + ++e+s +l++gWk+r+
  Pd.00g1291220.m01 647 VPREDRERMLIETEIFGREALNVIACEGWERVERPETYKQWQVRNLRAGFVQLPLDRGLVKRAGEKVRSGYHKDFVIDEDSRWLLQGWKGRT 738
                        *********************************************************************99888****************** PP

               GRAS 367 LvsvSaWr 374
                        ++++S W+
  Pd.00g1291220.m01 739 VYALSTWK 746
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    
MDRRLRAFSD SFNGVQLGNR VLPVLSHPNI VARSQLDSNT FLDNNYREFN NPQPVLTPNN  60
VSSYASVSPE DDSQEDCDFS DVVLKYINQM LMEEDMEDKT CMLQESLELQ AAEKSFYEVL  120
GKKYPPSPEL HQDYAIQYGE SPGDSFSGAG SNYITSTCNS GGYFSDNTLI QSPDGYLSQL  180
KGLPAYSISQ SRYGSSTRVG SLDGQVDSPN SLHMPDLNTE SQSVWQFKKG VEEASRFLPG  240
ETKLVVNLKA NGLSAQAPKV GTNGEVVKVE KKDEGEYSPS GSRGRKNMYR EDDDVEESRS  300
SKQAAVSTES ILRSELFDTV LLCSTGEGRE RLESLREALQ NGMSKSVPQN GQSKGSNGGK  360
GRGKKQTGKK EVVDLRTLLI SCAQAVAADD HRSANELLKK VRQHSSPFGD GTQRLAHCLA  420
DGLEARLAGT GSQIYKALVS KRTSAADFLK AHHLYLAASP FKKISNFVSN KTIMNLAQNA  480
TRVHVIDFGI LYGFQWPTLI QRISWRDGGP PRLRITGIEF PQPGFRPAER VEETGHRLAA  540
YAEKFNVPFE YNAIAKNWDT IKLEELKIDR DEVLVVNFLY RGKNLLDESV AVDSPRNRVL  600
DLIRRINPDL FIHGIVNGAF NAPFFVTRFR EALFHFSSLF DMLETVVPRE DRERMLIETE  660
IFGREALNVI ACEGWERVER PETYKQWQVR NLRAGFVQLP LDRGLVKRAG EKVRSGYHKD  720
FVIDEDSRWL LQGWKGRTVY ALSTWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein