PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1287950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 173aa MW: 19105.3 Da PI: 5.2996 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.1 | 5.3e-19 | 15 | 65 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k +g+Wv+eIr+p g ++r++lg+f t+e+Aa+a++ a++ ++g Pd.00g1287950.m01 15 SSYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 65 67*****999.**********8...325***********************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
MGEPNSSNAY GAATSSYRGV RKRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVAA 60 LHFRGREARL NFPELVNSLP RPASSNAEDI RMAAHEAALR LRSSPAAEAH EAGSSSSNVG 120 PVTVRLSPSQ IQAINESPLD SPKMWMQMSE SMMFSGGFED QWEDMQNDSL WDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71450.1 | 7e-67 | ERF family protein |