PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1284410.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 357aa MW: 40311.1 Da PI: 4.6661 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.8 | 3.1e-14 | 114 | 159 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 ykGVr++k +gr++AeIrdp + r +lg+f taeeAa+ + + +++ Pd.00g1284410.m01 114 YKGVRRRK-WGRYAAEIRDPI----QrCRKWLGTFATAEEAAAVYQKKKLE 159 9****998.**********83....359**************999877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MPGFKTLVLN QHVKLSKLKT EQPNKEENTS SVKRIRIIYN DPDATDSSSD DEEYDGKEDR 60 LLHDKRFVSE ILVVDTKYEP SADVLSHCKT NGGKIGLSMN FYDCKKTKRS SSMYKGVRRR 120 KWGRYAAEIR DPIQRCRKWL GTFATAEEAA AVYQKKKLEF DSIQSLGKTQ RHYQNLQLSD 180 KDKGAFESFQ LTERTKHEFQ GIPLSEESQD SLGDADIETF SAEETKRVFC HPSPSSVLEI 240 SGTASLGIGL KQVKEESSVE VFGGEGSVQP FFEEDLSILK FPEEPMLPLD TEQLDLGCGE 300 NYMFSSLDQF FDGMSDIVDY PAFNDGNGKA ICLPTLDSDF GQQDFAWIDQ NLNMACP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 121 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 2e-25 | ERF family protein |