PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1282580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 709aa    MW: 78201.9 Da    PI: 6.8102
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1282580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37.4e-202479156
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                       +++ +++t++q++ Le +F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  Pd.00g1282580.m01 24 KKRYHRHTANQIQKLEGMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 79
                       678899***********************************************998 PP
2START176.12.2e-552234472206
                        HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGG...CT-TT-SEEE CS
              START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddke...qWdetlakae 80 
                        +a  a++el+++ + +ep+W ks+    + +n + + ++f+++++       ++ea+r+sgvv+m+   lve ++d ++    + + +  a+
  Pd.00g1282580.m01 223 IAANAMEELLRLLQTNEPLWIKSAtdgrDVLNLESYERIFPRANShlknpnLRIEASRDSGVVIMNGLALVEMFMDPNKfgeLFPTIVSMAK 314
                        67889*********************9999**********99999*********************************77777777777*** PP

                        EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
              START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                        t+evissg      g lqlm+ elq+lsplv  R+f f+Ry++q ++g w+ivdvS d +++++   +  R+++lpSg+li++++ng+skv 
  Pd.00g1282580.m01 315 TIEVISSGmlgsqsGSLQLMYKELQVLSPLVQtREFCFLRYCQQIEQGLWAIVDVSYDFPRDNQ-FTNQCRSHRLPSGCLIQDMPNGYSKVS 405
                        ***************************************************************9.7999*********************** PP

                        EEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
              START 166 wvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                        wvehv+ +++ p h l+r l++sgla+ga +w+a+lqr ce+
  Pd.00g1282580.m01 406 WVEHVEIEDKAPtHRLYRDLIHSGLAFGAERWLAALQRMCER 447
                        ****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MEFGSGGGAG SGGDHDASDS QRRKKRYHRH TANQIQKLEG MFKECPHPDE KQRLQLSREL  60
GLAPRQIKFW FQNRRTQMKA QHERADNCAL RAENDKIRCE NIAIREALKN VICPACGVPP  120
LNEDSYFDEH KLRMENAQLK EELDRVSSIA AKCIGRPISQ LPPVQPIHVS SLELSMASFG  180
GHGVGGPSLD LDLLPGTTSS TMPSLPYHPT VLSDMDKSLM TDIAANAMEE LLRLLQTNEP  240
LWIKSATDGR DVLNLESYER IFPRANSHLK NPNLRIEASR DSGVVIMNGL ALVEMFMDPN  300
KFGELFPTIV SMAKTIEVIS SGMLGSQSGS LQLMYKELQV LSPLVQTREF CFLRYCQQIE  360
QGLWAIVDVS YDFPRDNQFT NQCRSHRLPS GCLIQDMPNG YSKVSWVEHV EIEDKAPTHR  420
LYRDLIHSGL AFGAERWLAA LQRMCERFAC LMVSGTSTRD LEGVIPSPEG KRSMMKLAQR  480
MVNNFCASIS TSNGHRWTTL SGMNEVGVRV TIHKSTDPGQ PNGVVLSAAT TIWLPVSPQN  540
VFNFFKDEKT RPQWDVLSNN NAVQEVAHIA NGSHPGNCIS VLRAFNTSQN NMLMLQESCI  600
DSSGSLVVYS PVDLPSINIA MSGEDPSYIP LLPSGFTISP DGRREQGDGA STSSCNVHGS  660
GGSLVTVAFQ ILVSSLPSAK LNLESVNTVN TLIGTTVQQI KAALNCNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein