PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1281330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 369aa MW: 40670.8 Da PI: 7.8884

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1281330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	13	74	6	55
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 +ft++++ e+e+ ++ n p +e LA+k ++ +qV +WFqNrR+ Pd.00g1281330.m01 13 RFTQSEVSEMEAILQQhnNTMPAREVLVALADKFsesaerkgkiAVQMKQVWNWFQNRRYAI 74 69**********9766999*****************99*************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGRPPSNGGP AFRFTQSEVS EMEAILQQHN NTMPAREVLV ALADKFSESA ERKGKIAVQM 60 KQVWNWFQNR RYAIRAKSSK VLGKLNVSPM SRDDSNPVRN VPQGPQPIAA PIHAPSAQGS 120 GKGASENSIF EFEAKSGRDG AWYDVANFLS HRYLETGDPE VLVRFAGFGP EEDEWVNVRK 180 HVRQRSLPCE SSECVAVLPG DLILCFQEGK EQALYFDAHV LDAQRRRHDV RGCRCRFLVR 240 YVHDQSEEIV PLRKVCRRPE TDYRLQQLHA VNEAASAEQK SMDHFMGSVT SAEMMQKQQN 300 TDGALAPPVL HANASLATQS TTPELKRSEV STVISSGNSN FPPGSAVITS GTATVVVPGG 360 SVENMPKGN

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGRPPSNGGP AFRFTQSEVS EMEAILQQHN NTMPAREVLV ALADKFSESA ERKGKIAVQM  60
KQVWNWFQNR RYAIRAKSSK VLGKLNVSPM SRDDSNPVRN VPQGPQPIAA PIHAPSAQGS  120
GKGASENSIF EFEAKSGRDG AWYDVANFLS HRYLETGDPE VLVRFAGFGP EEDEWVNVRK  180
HVRQRSLPCE SSECVAVLPG DLILCFQEGK EQALYFDAHV LDAQRRRHDV RGCRCRFLVR  240
YVHDQSEEIV PLRKVCRRPE TDYRLQQLHA VNEAASAEQK SMDHFMGSVT SAEMMQKQQN  300
TDGALAPPVL HANASLATQS TTPELKRSEV STVISSGNSN FPPGSAVITS GTATVVVPGG  360
SVENMPKGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.3	1e-136	HB-other family protein