PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1280660.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 279aa    MW: 30865.9 Da    PI: 6.3655
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1280660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.5e-0993140455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Pd.00g1280660.m01  93 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 140
                        8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSPSSLSYFC TSFLLSYVKK VVSPIVIPLS VLSLFFITRR TREEGAHLAD ETSGGSKATG  60
DGAQKQTKDN SEPPEAPKDY IHVRARRGQA TDSHSLAERV RREKISERMK FLQDLVPGCN  120
KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL STVNPRMDLN MEALLSKEIL QSRGSLQNAL  180
YQLDSAIPSF PFGYQPQQLP PLHSSSISSG TETQFPESPL NAAMRQSQGM QLPTFDRFGG  240
AAPQAPQFFE DDLQSVVQMG FGQIQQESLH GSMISADES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23690.11e-68bHLH family protein