PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1280130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 284aa    MW: 32571 Da    PI: 4.2138
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1280130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.35.1e-0943896128
                NAM  96 kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        +g + g+kk++v+y    r  k++kt+Wvmh+y+l
  Pd.00g1280130.m01   4 DGVQRGCKKIMVLYmsMVRGGKPKKTNWVMHQYHL 38 
                        56789*********6645777888*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MMLDGVQRGC KKIMVLYMSM VRGGKPKKTN WVMHQYHLGT EEDEKDGEYV ISKIYYQQQQ  60
VKQADKTDQD LPENFDLVIT KVDPVTPKSV TPEPPRTERK LADFDLGQDT RATSRDPFPQ  120
HPEMDQAEDE VHPEMDHAED EVHPEFEKPD HYDQHNVENE ADEVINNTEN NAQEDPKWWD  180
SESQNLLDSQ QLVEGLSLCD DLLQSQSPIR AGHENGEPAQ VKPRLADYAK LGPENLKKDL  240
EECQNIVLDP ANIMLEDTPP DFRLSQLEFG SQESFLSWGV KLAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.14e-77NAC family protein