PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1277960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 375aa MW: 41702.5 Da PI: 8.1546

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1277960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	80	2.7e-25	226	277	2	53
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 p++rWt++LH+r v+av LGG+e+AtP ++lelm+vk+Ltl+hv+SHLQ Y Pd.00g1277960.m01 226 PQMRWTTTLHARLVHAVYLLGGHERATPESVLELMDVKDLTLAHVRSHLQIY 277 89************************************************99 PP
2	Myb_DNA-binding	37.1	7.5e-12	228	275	2	45
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 +rWTt ++ +lv+av +lGg+ t++++ + m k +tl +++s++q Pd.00g1277960.m01 228 MRWTTTLHARLVHAVYLLGGHeraTPESVLELMDvKDLTLAHVRSHLQ 275 69*********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MKIYRTVFTA NKAATFSGQS TFSSFLFYQS STEPSLSFRD DEPIKATSES AEWIFLATNL 60 GLEMLSAACD QVPPQAHYAL FVLLLAIAAV IISIWELTAY QIVHSGMLWQ FYHPPPRNAP 120 FGTLPDIYGL VAGISQCICC IVRYVYCLWH ADNPFKASLL PAIFLLCLGG SKLSNNRRNA 180 NTTDNILGKP LDGNSSTSTS TITSTSRSSP LFQAQRGLLR SRWRAPQMRW TTTLHARLVH 240 AVYLLGGHER ATPESVLELM DVKDLTLAHV RSHLQIYWTV FTANRAAAFS GHSTFSRQSD 300 VHENPPSGDA TEDIIFDLQN PIMFGDQLSS AQTIHVQDNK DSLGKFFKAY HSKFKTSTLE 360 SFTVSVIFAL TSLKN

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MKIYRTVFTA NKAATFSGQS TFSSFLFYQS STEPSLSFRD DEPIKATSES AEWIFLATNL  60
GLEMLSAACD QVPPQAHYAL FVLLLAIAAV IISIWELTAY QIVHSGMLWQ FYHPPPRNAP  120
FGTLPDIYGL VAGISQCICC IVRYVYCLWH ADNPFKASLL PAIFLLCLGG SKLSNNRRNA  180
NTTDNILGKP LDGNSSTSTS TITSTSRSSP LFQAQRGLLR SRWRAPQMRW TTTLHARLVH  240
AVYLLGGHER ATPESVLELM DVKDLTLAHV RSHLQIYWTV FTANRAAAFS GHSTFSRQSD  300
VHENPPSGDA TEDIIFDLQN PIMFGDQLSS AQTIHVQDNK DSLGKFFKAY HSKFKTSTLE  360
SFTVSVIFAL TSLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-37	G2-like family protein