PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1275490.m03

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 705aa MW: 78656.7 Da PI: 6.1387

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1275490.m03	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.1	0.00036	538	575	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g1275490.m03 538 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 575 77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL 60 DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC 120 DGWQSQFSAG IRTIVVVAVP LGVVQLGSLN KVIENVKLVS EIRDVFSTLQ DSPVEQIHKA 180 ANREESPDVW SSVFPHIGKD SDSSYVFPLP ENCLKKAVEL ANKHGGLESS NLGCLESAKL 240 HQSKSSILNS EHSKLVGVEL LDRTKCKGES SGCKDTRMAS MIYANPLSHG SVQENVNLCD 300 SADLSATFLN SAAHGRINVD RVDFYQNEVL QVSEPSDVKF QKDLENLDFQ TESGHMDTSS 360 TSMAFPAGCE LHEALGSAFL NKGNYFDWEA EKNGDGITIE MPEGMKTGQL TSDSCQEHLL 420 EAVVANVCHS GNDVKSEKSF CKSMQSLLTT EKYPEPSSHT THTIDSENYS IDQPSLIAED 480 TQQCLSSSGV CGVISPKWFS SPCPSACSEQ LERSSGPSKN NKKRARPGEN SRPRPRDRQL 540 IQDRIKELRE LIPNGAKCSI DSLLERTIKH MLFLQSITKH ADKLNKCADA KEASMLGSSN 600 YERGSSWAVE VGGNLKVCSI MVENLNKNGQ MVVEMMCEEC SHFLEIAEAI RSLGLTILKG 660 VTEARSDKTW ICFVVEGQNN RSIHRMDILW SLVQILQPKN PMQQL

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL  60
DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC  120
DGWQSQFSAG IRTIVVVAVP LGVVQLGSLN KVIENVKLVS EIRDVFSTLQ DSPVEQIHKA  180
ANREESPDVW SSVFPHIGKD SDSSYVFPLP ENCLKKAVEL ANKHGGLESS NLGCLESAKL  240
HQSKSSILNS EHSKLVGVEL LDRTKCKGES SGCKDTRMAS MIYANPLSHG SVQENVNLCD  300
SADLSATFLN SAAHGRINVD RVDFYQNEVL QVSEPSDVKF QKDLENLDFQ TESGHMDTSS  360
TSMAFPAGCE LHEALGSAFL NKGNYFDWEA EKNGDGITIE MPEGMKTGQL TSDSCQEHLL  420
EAVVANVCHS GNDVKSEKSF CKSMQSLLTT EKYPEPSSHT THTIDSENYS IDQPSLIAED  480
TQQCLSSSGV CGVISPKWFS SPCPSACSEQ LERSSGPSKN NKKRARPGEN SRPRPRDRQL  540
IQDRIKELRE LIPNGAKCSI DSLLERTIKH MLFLQSITKH ADKLNKCADA KEASMLGSSN  600
YERGSSWAVE VGGNLKVCSI MVENLNKNGQ MVVEMMCEEC SHFLEIAEAI RSLGLTILKG  660
VTEARSDKTW ICFVVEGQNN RSIHRMDILW SLVQILQPKN PMQQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-175	bHLH family protein