PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1275490.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 711aa MW: 79365.6 Da PI: 6.252

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1275490.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.1	0.00037	540	577	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g1275490.m02 540 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 577 77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL 60 DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC 120 DGWQSQFSAG IRTIVVVAVP LGVVQLGSLN KVQVIENVKL VSEIRDVFST LQDSPVEQIH 180 KAANREESPD VWSSVFPHIG KDSDSSYVFP LPENCLKKAV ELANKHGGLE SSNLGCLESA 240 KLHQSKSSIL NSEHSKLVGV ELLDRTKCKG ESSGCKDTRM ASMIYANPLS HGSVQENVNL 300 CDSADLSATF LNSAAHGRIN VDRVDFYQNE VLQVSEPSDV KFQKDLENLD FQTESGHMDT 360 SSTSMAFPAG CELHEALGSA FLNKGNYFDW EAEKNGDGIT IEMPEGMKTG QLTSDSCQEH 420 LLEAVVANVC HSGNDVKSEK SFCKSMQSLL TTEKYPEPSS HTTHTIDSEN YSIDQPSLIA 480 EDTQQCLSSS GVCGVISPKW FSSPCPSACS EQLERSSGPS KNNKKRARPG ENSRPRPRDR 540 QLIQDRIKEL RELIPNGAKC SIDSLLERTI KHMLFLQSIT KHADKLNKCA DAKLCHKEAS 600 MLGSSNYERG SSWAVEVGGN LKVCSIMVEN LNKNGQMVVE MMCEECSHFL EIAEAIRSLG 660 LTILKGVTEA RSDKTWICFV VEGQNNRSIH RMDILWSLVQ ILQPKNPMQQ L

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL  60
DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC  120
DGWQSQFSAG IRTIVVVAVP LGVVQLGSLN KVQVIENVKL VSEIRDVFST LQDSPVEQIH  180
KAANREESPD VWSSVFPHIG KDSDSSYVFP LPENCLKKAV ELANKHGGLE SSNLGCLESA  240
KLHQSKSSIL NSEHSKLVGV ELLDRTKCKG ESSGCKDTRM ASMIYANPLS HGSVQENVNL  300
CDSADLSATF LNSAAHGRIN VDRVDFYQNE VLQVSEPSDV KFQKDLENLD FQTESGHMDT  360
SSTSMAFPAG CELHEALGSA FLNKGNYFDW EAEKNGDGIT IEMPEGMKTG QLTSDSCQEH  420
LLEAVVANVC HSGNDVKSEK SFCKSMQSLL TTEKYPEPSS HTTHTIDSEN YSIDQPSLIA  480
EDTQQCLSSS GVCGVISPKW FSSPCPSACS EQLERSSGPS KNNKKRARPG ENSRPRPRDR  540
QLIQDRIKEL RELIPNGAKC SIDSLLERTI KHMLFLQSIT KHADKLNKCA DAKLCHKEAS  600
MLGSSNYERG SSWAVEVGGN LKVCSIMVEN LNKNGQMVVE MMCEECSHFL EIAEAIRSLG  660
LTILKGVTEA RSDKTWICFV VEGQNNRSIH RMDILWSLVQ ILQPKNPMQQ L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-176	bHLH family protein