PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1275490.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 709aa MW: 79138.3 Da PI: 6.252 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.1 | 0.00037 | 538 | 575 | 13 | 55 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g1275490.m01 538 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 575 77899************77......7777779999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL 60 DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQYC 120 DGWQSQFSAG IRTIVVVAVP LGVVQLGSLN KVIENVKLVS EIRDVFSTLQ DSPVEQIHKA 180 ANREESPDVW SSVFPHIGKD SDSSYVFPLP ENCLKKAVEL ANKHGGLESS NLGCLESAKL 240 HQSKSSILNS EHSKLVGVEL LDRTKCKGES SGCKDTRMAS MIYANPLSHG SVQENVNLCD 300 SADLSATFLN SAAHGRINVD RVDFYQNEVL QVSEPSDVKF QKDLENLDFQ TESGHMDTSS 360 TSMAFPAGCE LHEALGSAFL NKGNYFDWEA EKNGDGITIE MPEGMKTGQL TSDSCQEHLL 420 EAVVANVCHS GNDVKSEKSF CKSMQSLLTT EKYPEPSSHT THTIDSENYS IDQPSLIAED 480 TQQCLSSSGV CGVISPKWFS SPCPSACSEQ LERSSGPSKN NKKRARPGEN SRPRPRDRQL 540 IQDRIKELRE LIPNGAKCSI DSLLERTIKH MLFLQSITKH ADKLNKCADA KLCHKEASML 600 GSSNYERGSS WAVEVGGNLK VCSIMVENLN KNGQMVVEMM CEECSHFLEI AEAIRSLGLT 660 ILKGVTEARS DKTWICFVVE GQNNRSIHRM DILWSLVQIL QPKNPMQQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31280.1 | 1e-178 | bHLH family protein |