PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g127480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24319 Da PI: 10.1534 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 25 | 75 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa+a+++a+++++g+ Pd.00g127480.m01 25 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDKAAREFRGA 75 59*******.**********8...557*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MAPTSPKSPT KSGSETPSPN SKEIRYRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAEE 60 AARAYDKAAR EFRGAKAKTN FPTPAELQLE AAANINSHNN NNVPKAAAAN NSPSQSSTVE 120 SSSPPPPPLD LALAPHFAAA GGYFTAASGF RAVPVARPVL FFDAFARAEN AAALQRAREM 180 CRFERAVAGP SSGGAHSDSS SSSVVDFDRS LPNGRLDLDL NLPPPSEVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 1e-28 | ERF family protein |