PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1272950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 26870.2 Da PI: 6.0349 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 8.1e-21 | 148 | 198 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g+ Pd.00g1272950.m01 148 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRGN 198 7********.**********7.....337*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MCLLKVANQR SSGGQYDRFE SSNDDDHGEE AYTYEGQPQA AAGNIDHELM NQLPHQNVSP 60 TMFLGYSRPT EMSAMAQFME SAQRVYRGSY GDFRATTQAE SSSGATVTEE ATNAVTTTTT 120 ATAASAVPST PSSSETVSFE EPGERRRRYR GVRQRPWGKW AAEIRDPHKA ARVWLGTFDT 180 AEAAARAYDE AALRFRGNRA KLNFPENNQQ LGFFHPPRNQ INPGGSSDFP APSWSQSGNN 240 PSSSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 144 | 149 | ERRRRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G43160.1 | 1e-14 | ERF family protein |