PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1272420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 208aa    MW: 22738.2 Da    PI: 4.257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1272420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.6e-142441055
                AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +++g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  Pd.00g1272420.m01  2 RSWGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 44
                       57**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MRSWGSWVSE IRAPNQKTRI WLGSYSTAEA AARAYDAALL CLKGSSANLN FPSTASSHFI  60
PQEITIMSPK SIQRVAAAAA NSFAIDNATT PTTTNIASPP SPPSPPPQSS SSSSLVSSPS  120
MSSSPSNNLL DDDMSSLMGS FEPYTPTYDH HHQAIDQLPM SSMEPWNNFD DGLQSPKYMD  180
QMFNGAFFDP PMIYDFYEES DIPLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-33ERF family protein