PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1267800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 405aa MW: 44296.4 Da PI: 4.5106

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1267800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59	1.1e-18	96	146	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f ta +Aa a+++a+k+++g Pd.00g1267800.m01 96 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALDAALAYDEAAKAMYG 146 56***999.******8...3.35**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MQIVEKTINQ SLSKLQGMGA YDQGSNGVAL TLDSTRKRKT RSRRDGTSVA ETLEKWKEYN 60 KQLESDNNEG KTRKVPAKGS KKGCMKGKGG PDNSRCNYRG VRQRTWGKWV AEIREPNRGS 120 RLWLGTFPTA LDAALAYDEA AKAMYGPAAR LNLPNVANYS SWKESSQETS SATTPSGSSA 180 VATPGCSGST TSSNHSEVCA EEDSKGFLDV KTENGEGESA IHAWSNAVNQ ALVKEETKDE 240 YTQGYFHKDQ PAVKPEAYVG DLNWAGGPYT GDYFENFTEE EVFDVDELLS PLDDTPVRNP 300 EPEQGLGSDV GQPGCSGMHP YECDRPSNLS YQLQFPDAKL LGSLNHMEQG PSGGEYNFDF 360 LKRDDVTGED DQGYYNLGLS DLGLGDFTGG TMQPEDGSYN FSMDM

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MQIVEKTINQ SLSKLQGMGA YDQGSNGVAL TLDSTRKRKT RSRRDGTSVA ETLEKWKEYN  60
KQLESDNNEG KTRKVPAKGS KKGCMKGKGG PDNSRCNYRG VRQRTWGKWV AEIREPNRGS  120
RLWLGTFPTA LDAALAYDEA AKAMYGPAAR LNLPNVANYS SWKESSQETS SATTPSGSSA  180
VATPGCSGST TSSNHSEVCA EEDSKGFLDV KTENGEGESA IHAWSNAVNQ ALVKEETKDE  240
YTQGYFHKDQ PAVKPEAYVG DLNWAGGPYT GDYFENFTEE EVFDVDELLS PLDDTPVRNP  300
EPEQGLGSDV GQPGCSGMHP YECDRPSNLS YQLQFPDAKL LGSLNHMEQG PSGGEYNFDF  360
LKRDDVTGED DQGYYNLGLS DLGLGDFTGG TMQPEDGSYN FSMDM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	40	TRKRKT
2	38	45	RKTRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	2e-46	ERF family protein