PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1266970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 348aa MW: 38352.6 Da PI: 6.1798 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92 | 4.5e-29 | 170 | 230 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqKe+ gs+fpr+YYrCt++ +Cp+kk+v+r ++dp ++e++Y+geH+++ Pd.00g1266970.m01 170 EDGFTWRKYGQKEIMGSRFPRGYYRCTHQklyNCPAKKQVQRLNNDPLTFEVMYRGEHTCH 230 7****************************999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MDENTISLIL QACSLARDLE SNLPNLANQP NLLSNSLDEI TKKFVTARDR VHGQDPSTSS 60 SLHNMLTVAH QQQIGTSHVQ EWLRSSYAQQ AMDIIQTQLV ADQKEAKIGF CIDDDDAEVK 120 GLQAMDIVSA SDTNIASSSS QRPRRRKDQG LISKITVPAP RIGNTEIPPE DGFTWRKYGQ 180 KEIMGSRFPR GYYRCTHQKL YNCPAKKQVQ RLNNDPLTFE VMYRGEHTCH MSATAPSIPP 240 PSAEHHNATQ ESMAQTLATT TTTDPPTTSL WLSMDFNRGS SSSGMIGGNR GGGDGVGTST 300 TTRYGKEVDF PVVDLADAMF NSGSSSSNSM DFIFHSAENK WDSEDKKN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 147 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 6e-48 | WRKY family protein |