PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1266960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 321aa MW: 36183.2 Da PI: 6.5087 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72.9 | 4e-23 | 131 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg +WrKYGqKe+ ++++pr+Y+rCt + +C+++k+v++ +++p++ ++tY g+H+++ Pd.00g1266960.m01 131 EDGRAWRKYGQKEILNAPYPRAYFRCTRKydqHCRATKQVQQVQDNPRLYQTTYIGQHTCK 191 79*************************998889**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MGSNHKRLIK ELVEGKKTAT ELQMLLHKPL GDHGSASAEE LVVKIMTSFT ESLSVLAAEK 60 KNPGDGHEDH QSGAFGEVYQ IKPEPSHSHC DDRSSGDSGQ SRKVQGSKDR RGCYKRRKTS 120 QSWTTISPAI EDGRAWRKYG QKEILNAPYP RAYFRCTRKY DQHCRATKQV QQVQDNPRLY 180 QTTYIGQHTC KSMVPPQMFI GSSDHWESQT VSSESGTPNK QNHDFLGSSA IPIVKQEEYK 240 EGTPTPSDLT DNLSSLETNH LWSDFKDDFA LCDPAAMCVS TKMGSDNEDV VSNMYLDMDL 300 VVKSIDFDRD FNFDEFPKNS L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 142 | KRRKTSQSWTTISPAIEDGRAWRKYGQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-39 | WRKY family protein |