PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1266320.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 316aa MW: 34082.5 Da PI: 9.5721 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33 | 1.4e-10 | 104 | 140 | 3 | 39 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +WT+eE+ ++ + k+lG+g+W+ Iar + ++Rt+ q Pd.00g1266320.m01 104 PWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQ 140 8*****************************99*9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 316 aa Download sequence |
MVKESMRKCS HCGHNGHNSR TCNNNGHGHG QNKGVCLKLF GVNIMEKEDD SMKKSYSMGN 60 LQAAGNADHN NNVVTIDHDA GYLSDGLIHN KRHKAAHERK KGRPWTEEEH RVFLAGLKKL 120 GKGDWRGIAR NFVTTRTPTQ DQGHQDSPIS PTRTATETSS EGSSSKVLPQ KINTANSSPP 180 KASVPSQILN RFPHLCLDSP PAAPVSPPCN VPNYPAVSYM MGIPENVPYA PMMHFARPSY 240 HYMIKTHGNF ATCAPVISHP SGIPSPRSLP SSPSMAGCIG MSSPAEKDAL ELKIGQPQPS 300 QGANLSSPTS GAIRVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61620.1 | 8e-47 | MYB_related family protein |