PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1265480.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | YABBY | ||||||||
Protein Properties | Length: 146aa MW: 16149.3 Da PI: 7.5645 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 101.5 | 1.8e-31 | 22 | 144 | 2 | 118 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnveke 89 ++ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++ + ++hl + + ++ l+e+++++ ++ + ++++ Pd.00g1265480.m02 22 HLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRALLLPPPNNQHLPHPFFNSphnlLQEDMRNAPSSNTLMNHQP 113 56789**********************************************99999*******99987745544455554444333333322 PP YABBY 90 esastsvssekl....senedeevprvppvirP 118 + + ++s + + ++++e+v r+ ++ +P Pd.00g1265480.m02 114 NYT--NESIMAIrgggLDHHKESVDRTMEAKKP 144 222..2222223566667777888888887777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MSSAAASSTA FNLPDQQQQQ QHLLSPSDQL CYVHCNFCDT VLAVSVPCSS LFKTVTVRCG 60 HCSNLLSVNM RALLLPPPNN QHLPHPFFNS PHNLLQEDMR NAPSSNTLMN HQPNYTNESI 120 MAIRGGGLDH HKESVDRTME AKKPKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00180.1 | 5e-21 | YABBY family protein |