PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1265120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 374aa    MW: 41246.1 Da    PI: 6.9096
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1265120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20180229255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Pd.00g1265120.m01 180 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 229
                        59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MATAIDLYSS SSMTPDLSDS LREDQLMKAL MPFMKSVSAT SSLTSISSSI SSPTSPSTSS  60
SFSSYPSSYT YHPPLYSSQP NLYPGFCSPS TTHMFDHVGF EQTGSIGLNQ LTPSQILQIQ  120
TQMVLQQQQE HQQKEQIAAL ASPASLQNQY QHQNPRTLKF FSPKAIPMKQ VGAPSKPTKL  180
YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF DTAEEAALAY DKAAYKLRGD FARLNFPHLK  240
HQGAHVSGDF GHYKPLHSSV DAKLQAICQS LAANSAKQGK TGELCSVAER KPAISSPSEV  300
SLKTELKGEW ELTGVECYRP EISSSPSQSV ESSAGSSSPE SDITFLEFSD SQWDEAENFG  360
LEKYPSVEID WSAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-58ERF family protein