PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1265020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 255aa    MW: 27923 Da    PI: 5.3158
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1265020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-1955103355
                AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g
  Pd.00g1265020.m01  55 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARSLRG 103
                        8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MAKPYAYMSS AGHAEALATW EWLCFASLKH EAGIVLEGDS LAVVNAPTAG QEIRFRGVRK  60
RPWGRFAAEI RDPWKKTRVW LGTFDSAEDA ARAYDTAARS LRGPKAKTNF PPPTSAADYD  120
INNNHRLPSH HPSLYDDDTV CDVVQASRPT SSSLSSTVES FSGPRPQPRP TSDAQLQRRP  180
VHPVPPDDCH SDCDSSSSVV DDGDDCVLTS SFRRVSPLPF DLNLPPPPMM DGLDLFKSGE  240
VYGDDHDLQA TALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-25ERF family protein