PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1264470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 544aa MW: 61247.5 Da PI: 6.6681 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 452 | 3.8e-138 | 168 | 538 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 l+++L+ cA+av+++dl laq+++ +l++++s +g+p+qRl ay++e+L ar a+s+s++ykal+++e + sse l+++++++ev+P++k Pd.00g1264470.m01 168 LKQVLIFCAKAVADNDLLLAQWMMDELRQMVSVSGEPIQRLGAYLLEGLVARRASSGSNIYKALRCKEPA---SSELLSYMHILYEVCPYFK 256 5799*****************************************************************9...9****************** PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182 f+++ aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg++++ s + l+ +g+rL+k+Ae ++vpfef++ + Pd.00g1264470.m01 257 FGYMSANGAIAEAMKDENRVHIIDFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSMSAyaRGGGLNIVGKRLSKLAELFKVPFEFHA-A 347 *********************************************************888789999************************.8 PP GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274 a + +++l++L v+pgEala n++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rf+e+l+yy+a+f+s++++ Pd.00g1264470.m01 348 AMSGCEVQLKHLGVRPGEALAMNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVT 439 9999**************************************************************************************** PP GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366 lpr+++eri+vE+++l+re+vn++aceg er+erhe l+kWr r+ +aGF+p+pls+ +++++k+ll ++++ yr++e++g+l+lgWk+r Pd.00g1264470.m01 440 LPRDHKERINVEQHCLAREVVNIIACEGIERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSD-KYRLQERDGALYLGWKNRD 530 ***********************************************************************5.5****************** PP GRAS 367 LvsvSaWr 374 Lv+ +aW+ Pd.00g1264470.m01 531 LVASCAWK 538 *******8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 544 aa Download sequence |
MSNRLYYQPV QEVEAYCLPR FQTLDPQVHY NNENSQSTVF SAQNFHIKYC TLESSAANGS 60 YTVYNSPSTV NFSPNGSPMS QQDSHSYPPP DQYHSPDQNY SSPISGSCIT DDATDFKYKL 120 KQLETVMLGP DSNILDNYCS TFQNGTSNTL PETDSWGQIM DSISKRDLKQ VLIFCAKAVA 180 DNDLLLAQWM MDELRQMVSV SGEPIQRLGA YLLEGLVARR ASSGSNIYKA LRCKEPASSE 240 LLSYMHILYE VCPYFKFGYM SANGAIAEAM KDENRVHIID FQIGQGSQWL TLIQAFAARP 300 GGPPHIRITG IDDSMSAYAR GGGLNIVGKR LSKLAELFKV PFEFHAAAMS GCEVQLKHLG 360 VRPGEALAMN FAFMLHHMPD ESVSTQNHRD RLLRLVKSLS PKVVTLVEQE SNTNTAAFFP 420 RFVETLNYYT AMFESIDVTL PRDHKERINV EQHCLAREVV NIIACEGIER VERHELLGKW 480 RLRFAMAGFT PYPLSSLVNA TIKTLLDNYS DKYRLQERDG ALYLGWKNRD LVASCAWKCK 540 PSTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |