PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1263100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HRT-like

Protein Properties

Length: 378aa MW: 42165 Da PI: 10.064

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1263100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	58.4	1.2e-18	269	299	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv +dGsvC+++Pv+gRKRC++HKGmRi Pd.00g1263100.m01 269 ICGVDVGDGSVCRTPPVPGRKRCAKHKGMRI 299 8*****************************7 PP
2	HRT-like	57.5	2.3e-18	343	373	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il dGs C+r+P++gRKRC eHKG+Ri Pd.00g1263100.m01 343 ICGFILADGSSCRRHPIQGRKRCDEHKGKRI 373 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MGASDLTVAV TRLKREDCKR TKHDSHFSNW KILVGPSDWE DYSLGKEGAE RYRVHNLPTK 60 ESPGVYELGI AVLRTGLGRE IGKLDPDYIV PVYLGQADNV RTRLQQYGRS GAHLGNGCPT 120 GHPSDRVQKG PGLFAEILSR DYPVVYRWAP MENKSVALKT ETQLLNTFDY AWNTNINGAR 180 RPDDVLQKLK MVSSSTTRFV NIAQKLVPFS LKKVGTRIES SKLLSPEDKF SAYANRESHN 240 PLSRVFKLGR SQPRLVLDRI GITQENTIIC GVDVGDGSVC RTPPVPGRKR CAKHKGMRIN 300 RSTRVGISNS TVDSESECSA ISSIVFHDAQ IINRDPVESF TSICGFILAD GSSCRRHPIQ 360 GRKRCDEHKG KRIKNPYS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MGASDLTVAV TRLKREDCKR TKHDSHFSNW KILVGPSDWE DYSLGKEGAE RYRVHNLPTK  60
ESPGVYELGI AVLRTGLGRE IGKLDPDYIV PVYLGQADNV RTRLQQYGRS GAHLGNGCPT  120
GHPSDRVQKG PGLFAEILSR DYPVVYRWAP MENKSVALKT ETQLLNTFDY AWNTNINGAR  180
RPDDVLQKLK MVSSSTTRFV NIAQKLVPFS LKKVGTRIES SKLLSPEDKF SAYANRESHN  240
PLSRVFKLGR SQPRLVLDRI GITQENTIIC GVDVGDGSVC RTPPVPGRKR CAKHKGMRIN  300
RSTRVGISNS TVDSESECSA ISSIVFHDAQ IINRDPVESF TSICGFILAD GSSCRRHPIQ  360
GRKRCDEHKG KRIKNPYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	3e-91	HRT-like family protein