PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1261410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 330aa    MW: 37594.1 Da    PI: 5.5042
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1261410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.41.3e-34121032102
                        HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
       HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                        F++k+y++++d+++++li+w + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+++l
  Pd.00g1261410.m01  12 FVMKTYQMVNDPTTDKLITWGRANNSFIVVDPLDFSQRLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQTHL 94 
                        9********************999*****************************************999.........*************** PP

                        XXXXXXXXX CS
       HSF_DNA-bind  94 lekikrkks 102
                        l+++ r+k+
  Pd.00g1261410.m01  95 LRNVVRRKH 103
                        ****99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MMEENNNVIA PFVMKTYQMV NDPTTDKLIT WGRANNSFIV VDPLDFSQRL LPAYFKHNNF  60
SSFVRQLNTY GFRKVDPDRW EFANEWFLRG QTHLLRNVVR RKHMGKNSYS NSNSSTCLLQ  120
GKHEELDDEE IVMEIARLKQ EQRALEEEME NMNKRLEATE RRPQQMMAFL HKVAEDPEIL  180
PRIMLEKDRT FRAQLGEKKR RVMMLTSTSS SSSGMGATNS VKTEDEDDGT VGVISSSPEP  240
GFEMESFYST SPETSTALEW GRQRRVVDRV RAAQDPYNMN PTASGHGFGN SSNSGYGYGN  300
RNGGAEVGYL TEEPIPAPPP YPFSLLEGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-92HSF family protein