PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1260190.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26598.7 Da PI: 8.1037 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 5.8e-19 | 5 | 53 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ + Pd.00g1260190.m01 5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53 59*******9.**********8.....334*********************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT 60 NFPISTTQTN TNTTTAAAAA MAVGSDPRGS SSDLDHSLSE PKGLSEILHA KLRKCSKLPS 120 PSMTCLRLDN ESSHIGVWQK RAGQRSDNSN WVMTVQLGKK KNSNNTNAAD DHGQSISSSS 180 PLIMSTSESS ASTSSARAPE LIAEMDEEEK IALQMIEELL NRNCPSPSNS SFGIQPGEES 240 FYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-58 | ERF family protein |