PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1258040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 423aa    MW: 46499.3 Da    PI: 8.157
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1258040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.72.7e-24187243259
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ + v+ei+Y+++H+he
  Pd.00g1258040.m01 187 SDGYNWRKYGQKQVKSPQGSRSYYRCTYSECYAKK-IECCDHSGYVTEIVYKSQHTHE 243
                        7********************************98.*********************8 PP
2WRKY97.96.4e-31286342359
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+
  Pd.00g1258040.m01 286 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAIDNTSAVIITYKGIHDHD 342
                        9*******************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MADHESFDAL QLGDLQNSAP ESRETQLETL AVPSTLELSE NDQCAGFQVN STSQSIDGAQ  60
LQEQLGVSHQ EILAIVTHQD SQMQTQSPVQ LAVYPTPLSE LSPTSVTQSI QTQTQSPLQL  120
TVYPTPLSEL SPTSVTQSIS SAPSPILLEQ KLPPEKVNTL CTPEVDKQNS SDHKFISSVP  180
LVKTSASDGY NWRKYGQKQV KSPQGSRSYY RCTYSECYAK KIECCDHSGY VTEIVYKSQH  240
THEPPRKKPK RRVKKSNLEY STSLLKPGKK PKFVVHAAGD VGISGDGYRW RKYGQKMVKG  300
NPHPRNYYRC TSAGCPVRKH IETAIDNTSA VIITYKGIHD HDMPVPKKRH GPPSAPLVAA  360
AAPASMNNLH IKKTDTHQNQ ISSTQWSVDT GGELTGEALD LGGEKAMESA RTLLSIGFEI  420
KPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247255KKPKRRVKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.12e-74WRKY family protein