PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1257410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 375aa    MW: 41648.3 Da    PI: 7.9099
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1257410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.5e-11310355655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri +++ +L++l P+     +k  + ae+L +Ave+Ik+Lq
  Pd.00g1257410.m01 310 SIAERMRRTRISERMKKLQDLFPNM----DKQINTAEMLDLAVEFIKDLQ 355
                        689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MRYRSAPSSF LMDLVDNNGG VGCEDSRYLR PSSPEVETVL ARFMSSCNEP DHHDNGANSL  60
QHHFEERAVK QEAGDSVSKQ NGYSNSSPMM YQAQQVHALD NNSFAAINST GLENSMQSKI  120
GVGNRPNLVR QSSSPAGFFP DLIVDNGFNV MKDGVSFRAG NGINGEASPS STSRLNNQLN  180
FSSGPSSYPS RMPRIAEMEN GNMGDGSQQD QGLGNASNSH CISNFPNDSW DISSFNDLKR  240
GRNNDGNKFS NSTALETQNN DFGHRNHGLT HHLSLPKHFE MPAMEKFLQF EDSIPCKIRA  300
KRGFATHPRS IAERMRRTRI SERMKKLQDL FPNMDKQINT AEMLDLAVEF IKDLQKQVKT  360
LGDIKAKCSC SIKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-63bHLH family protein