PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g125740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 342aa MW: 38096.7 Da PI: 6.3426

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g125740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +++++ G g+W++ ++ g++R++k+c++rw +yl Pd.00g125740.m01 14 KGPWTPEEDQKLMKYIQKNGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.9	9.9e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l Pd.00g125740.m01 67 RGKFSQEEEQTILNLHSILGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRSPCCDES GLKKGPWTPE EDQKLMKYIQ KNGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DIFSSLPHLL ALVNLKELLD HGGHPSWDEQ AVRLQAEAAQ MARLQYLQCL 180 LQPPPANNSF GAGSPSNLND ITDMETINLL SSLCSYQLDQ NPPQYPEANF QPVQDHNSIP 240 FSHLPDLQTY QTPSLNNKDM VNQAEDQFAV VLSQGQNSPN NPWNIPSSSN TTPSPTSMAP 300 PVAETSISNT MGDACSTSSF GGVANSAWSE LLLEDSFFNE IA

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRSPCCDES GLKKGPWTPE EDQKLMKYIQ KNGHGSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SQEEEQTILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG  120
FDPMTHRPRT DIFSSLPHLL ALVNLKELLD HGGHPSWDEQ AVRLQAEAAQ MARLQYLQCL  180
LQPPPANNSF GAGSPSNLND ITDMETINLL SSLCSYQLDQ NPPQYPEANF QPVQDHNSIP  240
FSHLPDLQTY QTPSLNNKDM VNQAEDQFAV VLSQGQNSPN NPWNIPSSSN TTPSPTSMAP  300
PVAETSISNT MGDACSTSSF GGVANSAWSE LLLEDSFFNE IA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-105	MYB family protein