PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1254270.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 1011aa MW: 110194 Da PI: 5.9304

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1254270.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	236	294	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g1254270.m01 236 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 294 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1011 aa Download sequence
MDLHGPTDME FNVNTGLNLL LTNTSSDQSV VDDGISSNIE DKRAKSELAV LRAELERMNA 60 ENQRLRGMLN QVTTNYNALQ VHLLTLMQSQ KAEQNSSAAE GHGVFDGNNK MVVEEKKLIN 120 GNGSQVVVPR QFMDLGLAAN NADTDEPSQS SSEERSRERS GSLGENVKVA GHSDDQEKKE 180 FGRGIGREES PDQPSQSWAP NKVPRLNSPK EVDQTEATMR KARVSVRARS EAPMITDGCQ 240 WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM 300 AMASTTSSAA RMLLSGSMPS ADGLMDSNFL TRTILPCSSS MATISASAPF PTVTLDLTQS 360 PNPLQLQRPP GQFNIPFPNP SQNFTNGPVS LLPQIFGQAL YNQSKFSGLQ MSQDMERAQL 420 GHQQQPGHQE QQQNSLADTS REGVNKIVSE LFKRLEISLT HELASLLFKS SDLSFLIVSV 480 FTCSFIVRSR TQKFLKMGTK FGASLVTPLL FLLLSHVVFS TTNDGLVRIG LKKMKIDQKC 540 HMNRRSNTIE QEETPGGPIR KYHLRGNLGD SEDTDIVALK NYMDAQYFGE IGIGSPAQKF 600 TVIFDTGSSN LWVPSAKCYF SVACFFHSKY KSSQSSTYTK NGKSAAIQYG TGAIAGFFSQ 660 DHVTVGNLVV KDQDFIEATK EPGITFVAAK FDGILGLGFQ EISVGNAVPV WYNLVNQGLV 720 TEPVFSFWFN RNTEGEEGGE IVFGGVDSNH YKGEHTYVPV TQKGYWQFDM GDVLIGGESS 780 GFCASGCSAI ADSGTSLLAG PTTVITQINH AIGASGVVSQ ECKTVVEQYG KTIIEMLLAQ 840 ARPKKICSQI GFCTFDGTHG VSMGIESMVN EKLEMTSDGV HDAACAACEM AVVWMQNRLR 900 LNETEDQILN YVNELCERLP SPSGESVVQC DALSSLPSVS FTIGGKVFDL APEQYVLKVG 960 EGVAAQCISG FIALDVGPPR GPLWILGDIF MGRYHTVFDY GNSTVGFAEA A

Sequence ? help Back to Top

Protein Sequence Length: 1011 aa Download sequence

MDLHGPTDME FNVNTGLNLL LTNTSSDQSV VDDGISSNIE DKRAKSELAV LRAELERMNA  60
ENQRLRGMLN QVTTNYNALQ VHLLTLMQSQ KAEQNSSAAE GHGVFDGNNK MVVEEKKLIN  120
GNGSQVVVPR QFMDLGLAAN NADTDEPSQS SSEERSRERS GSLGENVKVA GHSDDQEKKE  180
FGRGIGREES PDQPSQSWAP NKVPRLNSPK EVDQTEATMR KARVSVRARS EAPMITDGCQ  240
WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM  300
AMASTTSSAA RMLLSGSMPS ADGLMDSNFL TRTILPCSSS MATISASAPF PTVTLDLTQS  360
PNPLQLQRPP GQFNIPFPNP SQNFTNGPVS LLPQIFGQAL YNQSKFSGLQ MSQDMERAQL  420
GHQQQPGHQE QQQNSLADTS REGVNKIVSE LFKRLEISLT HELASLLFKS SDLSFLIVSV  480
FTCSFIVRSR TQKFLKMGTK FGASLVTPLL FLLLSHVVFS TTNDGLVRIG LKKMKIDQKC  540
HMNRRSNTIE QEETPGGPIR KYHLRGNLGD SEDTDIVALK NYMDAQYFGE IGIGSPAQKF  600
TVIFDTGSSN LWVPSAKCYF SVACFFHSKY KSSQSSTYTK NGKSAAIQYG TGAIAGFFSQ  660
DHVTVGNLVV KDQDFIEATK EPGITFVAAK FDGILGLGFQ EISVGNAVPV WYNLVNQGLV  720
TEPVFSFWFN RNTEGEEGGE IVFGGVDSNH YKGEHTYVPV TQKGYWQFDM GDVLIGGESS  780
GFCASGCSAI ADSGTSLLAG PTTVITQINH AIGASGVVSQ ECKTVVEQYG KTIIEMLLAQ  840
ARPKKICSQI GFCTFDGTHG VSMGIESMVN EKLEMTSDGV HDAACAACEM AVVWMQNRLR  900
LNETEDQILN YVNELCERLP SPSGESVVQC DALSSLPSVS FTIGGKVFDL APEQYVLKVG  960
EGVAAQCISG FIALDVGPPR GPLWILGDIF MGRYHTVFDY GNSTVGFAEA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-110	WRKY family protein