PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g125270.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 274aa    MW: 30872.1 Da    PI: 7.3677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g125270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.94.2e-1469120155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr ++P +   ++++ + a+i   A++++k+L+
  Pd.00g125270.m01  69 QRMTHIAVERNRRKQMNDYLAALRAMMPAC---YAQRGDQASIIGGAINFVKELE 120
                       79****************************...*******************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MLNNDVGQQG FNNLSLEASM LQSVNDFETN SGPAFNRVFS STEAPAASTA RRKRRRIQNI  60
KNKEDMETQR MTHIAVERNR RKQMNDYLAA LRAMMPACYA QRGDQASIIG GAINFVKELE  120
QLLQSLEGHR RIEQQSDHLN LASIFSSFFT FPQYSTCLNS HGHGVYNSSV HPNELMAEKR  180
SAIADVEVTM VESHANVKVL MKKHPRQLLK MVLGLHSLGL MILHVNVTTA DNMILYTFSV  240
KVEDNSQLTS MNEIAADVYE MVGRIQEEAQ LLAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15058ARRKRRRIQ
25256RKRRR
35357KRRRI
47081RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.12e-68bHLH family protein