PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g125270.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 274aa MW: 30872.1 Da PI: 7.3677 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.2e-14 | 69 | 120 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr ++P + ++++ + a+i A++++k+L+ Pd.00g125270.m01 69 QRMTHIAVERNRRKQMNDYLAALRAMMPAC---YAQRGDQASIIGGAINFVKELE 120 79****************************...*******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MLNNDVGQQG FNNLSLEASM LQSVNDFETN SGPAFNRVFS STEAPAASTA RRKRRRIQNI 60 KNKEDMETQR MTHIAVERNR RKQMNDYLAA LRAMMPACYA QRGDQASIIG GAINFVKELE 120 QLLQSLEGHR RIEQQSDHLN LASIFSSFFT FPQYSTCLNS HGHGVYNSSV HPNELMAEKR 180 SAIADVEVTM VESHANVKVL MKKHPRQLLK MVLGLHSLGL MILHVNVTTA DNMILYTFSV 240 KVEDNSQLTS MNEIAADVYE MVGRIQEEAQ LLAQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 50 | 58 | ARRKRRRIQ |
2 | 52 | 56 | RKRRR |
3 | 53 | 57 | KRRRI |
4 | 70 | 81 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 2e-68 | bHLH family protein |