PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1251720.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 361aa    MW: 38404.5 Da    PI: 7.8575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1251720.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.3e-11295340655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  Pd.00g1251720.m01 295 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 340
                        689*********************7....688*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MYPSTSSSSS QNPMGPGPSA TGLTRYGSAP GSLLTSAVDS VIGTVADREF SALRSQPPLG  60
HYFSGDGHGD DSSLTSSESS FKVNSSNGGR DATKPLLRSY GLNEMANAIG SPTSSSSCSS  120
PSALVRQRSS PAGFLSHLTA PDNNGGFSVT RGAGIYSSQG GTNGGHGHGV TRLKSQLSFT  180
RQDSLSQISE VSENAMEGVS SNNGHHRAMH SYPTTSFGME SWDNTNSIVF SAPPSKRAKN  240
MDGDLFNCLN ALESQFSLPQ TSLEMATVEK LLHIPEDSVP CKIRAKRGCA THPRSIAERE  300
RRTRISGKLK KLQDLVPNMD KQTSYADMLD LAVQHIKGLQ NQVEDLHKDL DNCTCGCKPN  360
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-86bHLH family protein