PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1251440.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 402aa MW: 45872.6 Da PI: 8.8781

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1251440.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.7	1.2e-20	48	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA+e+ Fsvr +skks ++ge++++++vC+keg+ ++e+++ +r+r + r +Cka+l v k+k g ++vt +e+ H+H+++ Pd.00g1251440.m02 48 DFYNQYAREAEFSVRSYSSKKS-KDGEVIRKKYVCNKEGSWSTETSS--VVKRHRGVGRESCKARLIVVKSKYGGYVVTIFEEAHTHPMT 134 6***************9999.8889************9988..8889999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MEANNGILVH METDSETNPS VSIFYPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAEFS 60 VRSYSSKKSK DGEVIRKKYV CNKEGSWSTE TSSVVKRHRG VGRESCKARL IVVKSKYGGY 120 VVTIFEEAHT HPMTTPRRRH LLKSHRRISG VDQLVAQQLI SVNVSTHQQY DILATQAGGI 180 ENVGFTQQDM YNSNRDRRMK IKGHDGEMLF DHFMNEQEKN PGFIFKLHEL PDQYILKRWT 240 RSARSDLVVD NDGVEISVDN SLIGKRSALF QQYSNVIDKV ILSDEASQIF CETLDSLIER 300 IKPLLHGAKE VLPSARRSIA FETSINEPDL VKAKGSGKRL KGRKELAREK YKGRRCNGCG 360 KYGQTHDKRN CPMLQKSSSN VDKDAFNGMD NSSSSQDDEF FR

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MEANNGILVH METDSETNPS VSIFYPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAEFS  60
VRSYSSKKSK DGEVIRKKYV CNKEGSWSTE TSSVVKRHRG VGRESCKARL IVVKSKYGGY  120
VVTIFEEAHT HPMTTPRRRH LLKSHRRISG VDQLVAQQLI SVNVSTHQQY DILATQAGGI  180
ENVGFTQQDM YNSNRDRRMK IKGHDGEMLF DHFMNEQEKN PGFIFKLHEL PDQYILKRWT  240
RSARSDLVVD NDGVEISVDN SLIGKRSALF QQYSNVIDKV ILSDEASQIF CETLDSLIER  300
IKPLLHGAKE VLPSARRSIA FETSINEPDL VKAKGSGKRL KGRKELAREK YKGRRCNGCG  360
KYGQTHDKRN CPMLQKSSSN VDKDAFNGMD NSSSSQDDEF FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-26	FAR1 family protein