PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1250700.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 596aa MW: 63904.2 Da PI: 6.8634

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1250700.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	1e-08	378	425	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g1250700.m02 378 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 425 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MGKDRTATPS WNPSGFGMEM QSNELNCGSQ QLPNSLFNAN WDNSMDQTDP FESALSSIVS 60 SPAATNAAIA AGKCGGNGEM IRELIGRLGS ICNSGEISSH SYICGNNSTN TSCYSTPLNS 120 SPKPNLSMID PQMRGNLPIP GNHLPSHPSL APFQADPGFV ERAARFSCFG GGNFGALNGQ 180 VNLNEAELAY RSMPKIDSGK LSRASSNQSL KVAAGSQLGV QESNKSSPQG ENSAPDKKFG 240 RFSRSSTPEN AELGDSREGS SVSEQIPGGD MSVKAENVTN SRKRKPVARG KAKETSSSPS 300 VKDGKVVAEK EEPNSKRSKT DEASGNEKAA AKAKTEPSGG SKATGDGAQK QTKDNSEPPE 360 APKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK AVMLDEIINY 420 VQSLQRQVEF LSMKLSTVNP RMDLNMEALL SKEILQSRGS LQNALYQLDS AIPSFPFGYQ 480 PQQLPPLHSS SISSGTETQF PESPLNAAMR QSQGMQLPTF DRFGGAAPQA PQFFEDDLQS 540 VVQMGFGQIQ QESLHGSMIS AXXXXAILSL LASLLVSVSN PLSVMCRFND FSPDES

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MGKDRTATPS WNPSGFGMEM QSNELNCGSQ QLPNSLFNAN WDNSMDQTDP FESALSSIVS  60
SPAATNAAIA AGKCGGNGEM IRELIGRLGS ICNSGEISSH SYICGNNSTN TSCYSTPLNS  120
SPKPNLSMID PQMRGNLPIP GNHLPSHPSL APFQADPGFV ERAARFSCFG GGNFGALNGQ  180
VNLNEAELAY RSMPKIDSGK LSRASSNQSL KVAAGSQLGV QESNKSSPQG ENSAPDKKFG  240
RFSRSSTPEN AELGDSREGS SVSEQIPGGD MSVKAENVTN SRKRKPVARG KAKETSSSPS  300
VKDGKVVAEK EEPNSKRSKT DEASGNEKAA AKAKTEPSGG SKATGDGAQK QTKDNSEPPE  360
APKDYIHVRA RRGQATDSHS LAERVRREKI SERMKFLQDL VPGCNKVTGK AVMLDEIINY  420
VQSLQRQVEF LSMKLSTVNP RMDLNMEALL SKEILQSRGS LQNALYQLDS AIPSFPFGYQ  480
PQQLPPLHSS SISSGTETQF PESPLNAAMR QSQGMQLPTF DRFGGAAPQA PQFFEDDLQS  540
VVQMGFGQIQ QESLHGSMIS AXXXXAILSL LASLLVSVSN PLSVMCRFND FSPDES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	2e-85	bHLH family protein