PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1248860.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 25441.4 Da PI: 8.3797 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 2.8e-16 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a+++a++ l+g Pd.00g1248860.m01 42 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDKAARLLRG 91 577******.7*********42...36***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDSLDSTKVP ADDQFQTQTF QENKERISAM RKVNSNNISG KRFLGVRQRP SGRWVAEIKD 60 SSQKLRLWLG TFDRAEEAAL AYDKAARLLR GRNAKTNFPC HIMNTHEENC SILRKNPRLY 120 QLLQHAIMKN HAIARSSSMK INPWDRNQIR GIDFDTLVEE TIVCSSSGNS SGQDHDDHED 180 RNKLCALSFG SCKVYSSVVV APSFSTSSQT QCQQEHEEKG YQEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 1e-16 | ERF family protein |