PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1248090.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 979aa MW: 109834 Da PI: 7.6348

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1248090.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.8	4e-08	175	222	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN++f L+ ++P + sk + a +L + ++Y++sLq Pd.00g1248090.m02 175 SHSLAERVRRGKINERFRCLQNIVPGC----SKTMGMAVMLDEIINYVQSLQ 222 8***********************9....788***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 979 aa Download sequence
MAEFTSDMQS IAPSLPFLDI APNTNMEPIH QYTDQFNPTV LDFYSSLNFQ TCMPFSNDNY 60 FSSQGPEFQG NLVQNFPNFF DHDNKSNQND EAPAVQHLAG AGAGNGFQEC KKRRAMDDVS 120 ESSSGISTPP VSETGVKIKN SSGRGKRLKK SNEKEDEKPK DVVHVRARRG QATDSHSLAE 180 RVRRGKINER FRCLQNIVPG CSKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASSFYD 240 FNSETDDMET MQSAKVYEAV ELERMKREGY GGYEIWRILS SKAEIAEKGA GLNVHFVFKY 300 IVRGKTRDGH GKQNQKYARE SSQTNWVPEL SPIANIVVRR CSKILGVPTT ELCEGFNSEA 360 SESIKLPLCY AKNFLEYCCF RALALSTQVT GHLADRKFRR LTYDMMLAWE APAATSQPIL 420 TGPTSFVQLD EDLSVGVEAF SRIAPAVPTI ANVIISENIF EVLTASTGGR LLFSTYDKYL 480 SGLERAIRKM RTQSESSLLS AMRSPRGEKI LEVDGTVTTQ PVLEHVGIST WPGRLILTDH 540 AFYFEALRVV SYDKAKRYDL SDDLKQVVKP ELTGPWGTRL FDKAVFYKSI SLSEPAVIEF 600 PELKGHTRRD YWLAIIREIL YVHRFINNFQ IKGVKRDEAL SKAVLGILRL QAIQEICSAN 660 PLRYEALLMF NLCDQLPGGD LILETLADMS TVRELARSSN SKPGGGMYSI SALDMISNLG 720 FAFGTSSNNS VEAGLAVGEI TVGEVTLLER AVKESKNNYE KVAQAQATVD GVKVEGIDTN 780 FAVMKELLFP FMELGKCLLS LAFWEDPMKS LVFCGVFTYI ICRGWLSYAF ALMLVFIAVF 840 MALTRYFSQG KSIHEVKVLA PPAMNTMEQL LAVQNAISQA EGIIQDGNVV LLKIRALLLS 900 LFPQASEKFA VALVVAALTL AFMPSRYVFL LMFLEMFTRY SPIRRASTER WMRRLREWWF 960 SIPAAPVILE REKEEKKKK

Sequence ? help Back to Top

Protein Sequence Length: 979 aa Download sequence

MAEFTSDMQS IAPSLPFLDI APNTNMEPIH QYTDQFNPTV LDFYSSLNFQ TCMPFSNDNY  60
FSSQGPEFQG NLVQNFPNFF DHDNKSNQND EAPAVQHLAG AGAGNGFQEC KKRRAMDDVS  120
ESSSGISTPP VSETGVKIKN SSGRGKRLKK SNEKEDEKPK DVVHVRARRG QATDSHSLAE  180
RVRRGKINER FRCLQNIVPG CSKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASSFYD  240
FNSETDDMET MQSAKVYEAV ELERMKREGY GGYEIWRILS SKAEIAEKGA GLNVHFVFKY  300
IVRGKTRDGH GKQNQKYARE SSQTNWVPEL SPIANIVVRR CSKILGVPTT ELCEGFNSEA  360
SESIKLPLCY AKNFLEYCCF RALALSTQVT GHLADRKFRR LTYDMMLAWE APAATSQPIL  420
TGPTSFVQLD EDLSVGVEAF SRIAPAVPTI ANVIISENIF EVLTASTGGR LLFSTYDKYL  480
SGLERAIRKM RTQSESSLLS AMRSPRGEKI LEVDGTVTTQ PVLEHVGIST WPGRLILTDH  540
AFYFEALRVV SYDKAKRYDL SDDLKQVVKP ELTGPWGTRL FDKAVFYKSI SLSEPAVIEF  600
PELKGHTRRD YWLAIIREIL YVHRFINNFQ IKGVKRDEAL SKAVLGILRL QAIQEICSAN  660
PLRYEALLMF NLCDQLPGGD LILETLADMS TVRELARSSN SKPGGGMYSI SALDMISNLG  720
FAFGTSSNNS VEAGLAVGEI TVGEVTLLER AVKESKNNYE KVAQAQATVD GVKVEGIDTN  780
FAVMKELLFP FMELGKCLLS LAFWEDPMKS LVFCGVFTYI ICRGWLSYAF ALMLVFIAVF  840
MALTRYFSQG KSIHEVKVLA PPAMNTMEQL LAVQNAISQA EGIIQDGNVV LLKIRALLLS  900
LFPQASEKFA VALVVAALTL AFMPSRYVFL LMFLEMFTRY SPIRRASTER WMRRLREWWF  960
SIPAAPVILE REKEEKKKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	139	KKRRAMDDVSESSSGISTPPVSETGVKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73830.1	2e-58	bHLH family protein