PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1248090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 972aa MW: 109117 Da PI: 7.6348 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.8 | 3.9e-08 | 175 | 222 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN++f L+ ++P + sk + a +L + ++Y++sLq Pd.00g1248090.m01 175 SHSLAERVRRGKINERFRCLQNIVPGC----SKTMGMAVMLDEIINYVQSLQ 222 8*************************9....788*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 972 aa Download sequence |
MAEFTSDMQS IAPSLPFLDI APNTNMEPIH QYTDQFNPTV LDFYSSLNFQ TCMPFSNDNY 60 FSSQGPEFQG NLVQNFPNFF DHDNKSNQND EAPAVQHLAG AGAGNGFQEC KKRRAMDDVS 120 ESSSGISTPP VSETGVKIKN SSGRGKRLKK SNEKEDEKPK DVVHVRARRG QATDSHSLAE 180 RVRRGKINER FRCLQNIVPG CSKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASSFYD 240 FNSETDDMET MQSAKVYEAV ELERMKREGY GGYEIWRILS SKAEIAEKGA GLNVHFVFKY 300 IVRGKTRDGH GKQNQKYARE SSQTNWVPEL SPIANIVVRR CSKILGVPTT ELCEGFNSEA 360 SESIKLPLCY AKNFLEYCCF RALALSTQVT GHLADRKFRR LTYDMMLAWE APAATSQPIL 420 TLDEDLSVGV EAFSRIAPAV PTIANVIISE NIFEVLTAST GGRLLFSTYD KYLSGLERAI 480 RKMRTQSESS LLSAMRSPRG EKILEVDGTV TTQPVLEHVG ISTWPGRLIL TDHAFYFEAL 540 RVVSYDKAKR YDLSDDLKQV VKPELTGPWG TRLFDKAVFY KSISLSEPAV IEFPELKGHT 600 RRDYWLAIIR EILYVHRFIN NFQIKGVKRD EALSKAVLGI LRLQAIQEIC SANPLRYEAL 660 LMFNLCDQLP GGDLILETLA DMSTVRELAR SSNSKPGGGM YSISALDMIS NLGFAFGTSS 720 NNSVEAGLAV GEITVGEVTL LERAVKESKN NYEKVAQAQA TVDGVKVEGI DTNFAVMKEL 780 LFPFMELGKC LLSLAFWEDP MKSLVFCGVF TYIICRGWLS YAFALMLVFI AVFMALTRYF 840 SQGKSIHEVK VLAPPAMNTM EQLLAVQNAI SQAEGIIQDG NVVLLKIRAL LLSLFPQASE 900 KFAVALVVAA LTLAFMPSRY VFLLMFLEMF TRYSPIRRAS TERWMRRLRE WWFSIPAAPV 960 ILEREKEEKK KK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 139 | KKRRAMDDVSESSSGISTPPVSETGVKIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73830.1 | 2e-58 | bHLH family protein |