PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1248090.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 972aa    MW: 109117 Da    PI: 7.6348
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1248090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.83.9e-08175222455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR +iN++f  L+ ++P +    sk +  a +L + ++Y++sLq
  Pd.00g1248090.m01 175 SHSLAERVRRGKINERFRCLQNIVPGC----SKTMGMAVMLDEIINYVQSLQ 222
                        8*************************9....788*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 972 aa     Download sequence    
MAEFTSDMQS IAPSLPFLDI APNTNMEPIH QYTDQFNPTV LDFYSSLNFQ TCMPFSNDNY  60
FSSQGPEFQG NLVQNFPNFF DHDNKSNQND EAPAVQHLAG AGAGNGFQEC KKRRAMDDVS  120
ESSSGISTPP VSETGVKIKN SSGRGKRLKK SNEKEDEKPK DVVHVRARRG QATDSHSLAE  180
RVRRGKINER FRCLQNIVPG CSKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASSFYD  240
FNSETDDMET MQSAKVYEAV ELERMKREGY GGYEIWRILS SKAEIAEKGA GLNVHFVFKY  300
IVRGKTRDGH GKQNQKYARE SSQTNWVPEL SPIANIVVRR CSKILGVPTT ELCEGFNSEA  360
SESIKLPLCY AKNFLEYCCF RALALSTQVT GHLADRKFRR LTYDMMLAWE APAATSQPIL  420
TLDEDLSVGV EAFSRIAPAV PTIANVIISE NIFEVLTAST GGRLLFSTYD KYLSGLERAI  480
RKMRTQSESS LLSAMRSPRG EKILEVDGTV TTQPVLEHVG ISTWPGRLIL TDHAFYFEAL  540
RVVSYDKAKR YDLSDDLKQV VKPELTGPWG TRLFDKAVFY KSISLSEPAV IEFPELKGHT  600
RRDYWLAIIR EILYVHRFIN NFQIKGVKRD EALSKAVLGI LRLQAIQEIC SANPLRYEAL  660
LMFNLCDQLP GGDLILETLA DMSTVRELAR SSNSKPGGGM YSISALDMIS NLGFAFGTSS  720
NNSVEAGLAV GEITVGEVTL LERAVKESKN NYEKVAQAQA TVDGVKVEGI DTNFAVMKEL  780
LFPFMELGKC LLSLAFWEDP MKSLVFCGVF TYIICRGWLS YAFALMLVFI AVFMALTRYF  840
SQGKSIHEVK VLAPPAMNTM EQLLAVQNAI SQAEGIIQDG NVVLLKIRAL LLSLFPQASE  900
KFAVALVVAA LTLAFMPSRY VFLLMFLEMF TRYSPIRRAS TERWMRRLRE WWFSIPAAPV  960
ILEREKEEKK KK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111139KKRRAMDDVSESSSGISTPPVSETGVKIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.12e-58bHLH family protein