PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1246200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 168aa    MW: 18459.2 Da    PI: 9.5966
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1246200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.54e-155599347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                        W++eE+  +v + ++lG+g+Wk I+r++ ++Rt+ q+ s+ qky
  Pd.00g1246200.m01 55 TWSEEEHRVFVMGLEKLGKGDWKGISRHFVTTRTPTQVASHAQKY 99
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MVHCLSSVAA SSPTTPSSST SSRLQNSALI DENFEKMYPS DGLTALPQEN NKGVTWSEEE  60
HRVFVMGLEK LGKGDWKGIS RHFVTTRTPT QVASHAQKYF LRLNTLNKKR RRPNLFYLSA  120
VFSSTLAAES AAPLPTAATD LELKLAALMP LDQQTKPCPR ALLIAPIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-26MYB_related family protein