PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1245790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 395aa    MW: 42647.4 Da    PI: 6.0608
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1245790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.8e-10237285355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Pd.00g1245790.m01 237 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 285
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MTMSSVSMFK PSNGADPFFG SGWDPIVSLS QSDNFGGSSV VSHREFSNPP YPVALENPGM  60
SSTSHLVQYP SDSSYVEMVP KLPCFGSGSF SEMVGSFGLS ECAQIANPGC AANYNPNREG  120
GTERTSTIGA QSHDDHQISE EGALGSSPNG KRRKRVPESN SAFSPNKNAE GEINKDLSGE  180
SSDYLKEQDE KKAKGEDNTA ASLRGKQMGK QAKESSQSGD PKDSYIHVRA RRGQATNSHS  240
LAERVRREKI SERMRLLQEL VPGCNKITGK AVMLDEIINY VQSLQQQVEF LSMKLATVNP  300
ELNIDIERIL SKDILNSRSG SGAIFGFSPG ISSSHPYPHG MFPGNLPSMP SSAPQFPSLP  360
QTVLDSELQG LFHMGFDSSS AIDNLGQNGR LKSEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-92bHLH family protein