PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1245780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 633aa MW: 69007.1 Da PI: 7.2177

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1245780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.1	6.8e-16	272	331	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g1245780.m01 272 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 331 78*****************988886678446***********************98 PP
2	AP2	49.8	8.2e-16	376	425	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g Pd.00g1245780.m01 376 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 425 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MGYMLGCSPA LLASSAAAAL PSAFYNLNPH LSSSGLCYGV GENGGFHSPL TVMPLKSDGS 60 LCIMEALSRS QTEGMVVPNS SPKLEDFLGG ASMGAGDYGS QEREAMALSL DSIYYHENAD 120 AEQHIPVHSH PYYSGIPCHG MYQTPLEEES KQTHIVGSEN PQMTQMQEGL KTWVARQYSA 180 HQALQQHMNN NLVHDGGGSG SVNGAMNCGD LQSLTLSMSP GSQSSCVTAP RQISPTGTEC 240 VAIETKKRGG GKLSQKQPVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ 300 TRKGRQVYLG GYDMEEKAAR AYDLAALKYW GSATHINFPL ENYTAQLEEM KNMSRQEYVA 360 HLRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFGTQE EAAEAYDIAA 420 IKFRGVNAVT NFDITRYDVE KIMASNTLLA GEFARRTKEI EPNIEANAVE YNPSAQNNGE 480 ANQPEINNGN GLDWKMALYQ SAQEQPTSCV QTVDQKSIGS LNYRHPSFSM ALQDLIGVES 540 VNSSQPLMDE SAKVGAHFSN PSSLVTSLSS SREASPDKSG PNMLFAKPPL ASKFICPTSA 600 AAAAVSSWFP TAQLRPAAIS MSHLPLFAAW NDT

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MGYMLGCSPA LLASSAAAAL PSAFYNLNPH LSSSGLCYGV GENGGFHSPL TVMPLKSDGS  60
LCIMEALSRS QTEGMVVPNS SPKLEDFLGG ASMGAGDYGS QEREAMALSL DSIYYHENAD  120
AEQHIPVHSH PYYSGIPCHG MYQTPLEEES KQTHIVGSEN PQMTQMQEGL KTWVARQYSA  180
HQALQQHMNN NLVHDGGGSG SVNGAMNCGD LQSLTLSMSP GSQSSCVTAP RQISPTGTEC  240
VAIETKKRGG GKLSQKQPVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ  300
TRKGRQVYLG GYDMEEKAAR AYDLAALKYW GSATHINFPL ENYTAQLEEM KNMSRQEYVA  360
HLRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFGTQE EAAEAYDIAA  420
IKFRGVNAVT NFDITRYDVE KIMASNTLLA GEFARRTKEI EPNIEANAVE YNPSAQNNGE  480
ANQPEINNGN GLDWKMALYQ SAQEQPTSCV QTVDQKSIGS LNYRHPSFSM ALQDLIGVES  540
VNSSQPLMDE SAKVGAHFSN PSSLVTSLSS SREASPDKSG PNMLFAKPPL ASKFICPTSA  600
AAAAVSSWFP TAQLRPAAIS MSHLPLFAAW NDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-155	AP2 family protein