PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1244620.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 364aa MW: 39696.1 Da PI: 9.7692 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.3 | 2.3e-31 | 292 | 349 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+ Pd.00g1244620.m01 292 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 349 99************************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MAVELMMGFI DSFAAQMEEN AVKEAASAGI QSVEKFISLI SQHHHQFQDS SFSSSSNPEA 60 ATEYKAVADM AVNKFRKVIS LLDKGRTGHA RFRRAPVTPS PPPPPPLPQE TETQIPRPSI 120 QEPHNPKTDQ PPGFKTEQSS AFKVYCPTPS VRLPPLPHNP HLKTTPVVLT KSVGCAERKL 180 DAPTTINFSP SPSISAANSF MSSLTTGDAE GSVQHSMSSG FQFINMSQSS SGKPPLSSSS 240 LKRKCNSMDD VAALRCGSSS GRCHCSKKRK SKVKRVVRVP AISMKMADIP PDDYSWRKYG 300 QKPIKGSPHP RGYYKCSSQR GCLARKHVER ALDDPTMLIV TYEGDHNHSH SVTDPTPALV 360 LESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 5e-79 | WRKY family protein |