PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1244620.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 364aa    MW: 39696.1 Da    PI: 9.7692
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1244620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.3e-31292349359
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  Pd.00g1244620.m01 292 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 349
                        99************************999****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MAVELMMGFI DSFAAQMEEN AVKEAASAGI QSVEKFISLI SQHHHQFQDS SFSSSSNPEA  60
ATEYKAVADM AVNKFRKVIS LLDKGRTGHA RFRRAPVTPS PPPPPPLPQE TETQIPRPSI  120
QEPHNPKTDQ PPGFKTEQSS AFKVYCPTPS VRLPPLPHNP HLKTTPVVLT KSVGCAERKL  180
DAPTTINFSP SPSISAANSF MSSLTTGDAE GSVQHSMSSG FQFINMSQSS SGKPPLSSSS  240
LKRKCNSMDD VAALRCGSSS GRCHCSKKRK SKVKRVVRVP AISMKMADIP PDDYSWRKYG  300
QKPIKGSPHP RGYYKCSSQR GCLARKHVER ALDDPTMLIV TYEGDHNHSH SVTDPTPALV  360
LESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-79WRKY family protein