PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1244430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 275aa    MW: 30151.5 Da    PI: 7.5255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1244430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.2e-1270117455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h   Er RR+++++ f+ L  llP++      K  K++i+ +Av+YIksL+
  Pd.00g1244430.m01  70 MHTWTERERRKKMRDMFSSLHALLPQL----PAKAYKSTIVDEAVRYIKSLE 117
                        57788*********************6....399****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSCLQQNSVL GSPNSNLGTC GGGELLKLEK MGVNVNSYLN SSSALMEKGV IKESSGKAAS  60
GGGNESEHGM HTWTERERRK KMRDMFSSLH ALLPQLPAKA YKSTIVDEAV RYIKSLEKTL  120
QTKQKQKLDK LQRQSTSALI ASNTELAGET REAFLADHLH PSKNLMVTNA FPASLSPACF  180
ETWFSPTVVV NICSPDAQFS VCSQRKPGLL TTILYILEKH ELDVVSAHIS SDQYRCMYMI  240
HAHAGGACDH FPEALSVEDT FKLAAGEINL WLLSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-37bHLH family protein