PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1242690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 293aa MW: 31371.5 Da PI: 7.3505 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 120.8 | 1.6e-37 | 58 | 162 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 a+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ +++ Pd.00g1242690.m01 58 APKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGA-------LKIPtsap 142 799*************************************************************8888855521111.......12221112 PP TCP 89 ..kaaksaa.kskksqksaa 105 + ++ + k+k++++s++ Pd.00g1242690.m01 143 dpRPGEDPPdKKKRKRNSNS 162 22222222212222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MTMTEKRELE PDQATTSVDL RINGGEESDS EEPAGPSQAL MLAPKDERDV AMPVAVHAPK 60 RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD GETIRWLLEH AEPAIIAATG 120 TGTVPAIAMS VNGALKIPTS APDPRPGEDP PDKKKRKRNS NSEYVDLNDG VSASAGLAPL 180 TTERHHQQPA VQAVVPQGVL PMWAIPSNGV VPGAFFMVPS ASTQPHIFTF PTTVAAAPFI 240 NISARPISSF VGPSSASATT HMAASTAPQT LRDFSLEIYD KKELQFMSGS SNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51910.2 | 1e-75 | TCP family protein |