PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1239360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 483aa MW: 53934.8 Da PI: 5.7678

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1239360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.3e-35	16	106	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl k+y++++d++++e++sws+n++sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +++k+l Pd.00g1239360.m01 16 FLLKTYDMVDDSATDEIVSWSTNKKSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFIQDQKHL 98 9**************************************************************999.........*********** PP XXXXXXXX CS HSF_DNA-bind 94 lekikrkk 101 l++i+r+k Pd.00g1239360.m01 99 LKNIHRRK 106 ****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MEGASTAGGG GGPAPFLLKT YDMVDDSATD EIVSWSTNKK SFVVWNPPEF ARLLLPTYFK 60 HNNFSSFIRQ LNTYGFRKID PERWEFANED FIQDQKHLLK NIHRRKPIHS HSNPQGSMVD 120 PERAALDDEI EKLSHDKATL EANISRFKQQ RSDAKLQLED LTQRVNSMEQ RQKDLLKFLD 180 KNVQNPTFVE HLTRKIEAMD FSACNKKRRL PDVDHLQPVV ENSFVDNQSS SRSEFGNIFH 240 QDFSSKLRLE LSPAVSDINL VSRSTQSSNE DGYSPTRKIS EELKGVQKGT EGLLFAPETL 300 ELSDTGTSFA FKMDSLLSRK VLTVGNPRLH SLQPGLSSNE EGDGHISCQL KLTLASSPLQ 360 VNSSPHSATI PQVGQDISKS LASGLNANGK ESDIRAFTNK NPADEDVHKT CSLEATNNNQ 420 GPPPAPARVN DVFWEQFLTE RPGCSENEEA SSNYRGNPYD EQDDGRLGHG MSRSAKDAET 480 LTL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MEGASTAGGG GGPAPFLLKT YDMVDDSATD EIVSWSTNKK SFVVWNPPEF ARLLLPTYFK  60
HNNFSSFIRQ LNTYGFRKID PERWEFANED FIQDQKHLLK NIHRRKPIHS HSNPQGSMVD  120
PERAALDDEI EKLSHDKATL EANISRFKQQ RSDAKLQLED LTQRVNSMEQ RQKDLLKFLD  180
KNVQNPTFVE HLTRKIEAMD FSACNKKRRL PDVDHLQPVV ENSFVDNQSS SRSEFGNIFH  240
QDFSSKLRLE LSPAVSDINL VSRSTQSSNE DGYSPTRKIS EELKGVQKGT EGLLFAPETL  300
ELSDTGTSFA FKMDSLLSRK VLTVGNPRLH SLQPGLSSNE EGDGHISCQL KLTLASSPLQ  360
VNSSPHSATI PQVGQDISKS LASGLNANGK ESDIRAFTNK NPADEDVHKT CSLEATNNNQ  420
GPPPAPARVN DVFWEQFLTE RPGCSENEEA SSNYRGNPYD EQDDGRLGHG MSRSAKDAET  480
LTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-171	HSF family protein