PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g123920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 361aa MW: 40357.3 Da PI: 6.4488 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.4 | 2.3e-12 | 185 | 231 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P + kK++Ka++L A++Y+k+Lq Pd.00g123920.m01 185 DHVLAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKYVKHLQ 231 58899**********************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MDMISSAKWV SDLEMEDPTF IHQYEMNSLD YSLDDLNFQS FSSESYSSDP NFTPKATHNF 60 SNASIETPHQ AGTHERPAKQ PKNHTTWNPC TTDHTFMAKA ASSSSSHLIS FDNSNSSPPT 120 SSHQFYGTLD NTMKPKNEVE YSNGKLNLTT LISQGSYDPQ TCSPRHGQGI KRAATVTRSP 180 LHAQDHVLAE RKRREKLSQR FIALSALVPG LKKMDKASVL GDAIKYVKHL QERTKMLEEQ 240 AVKKTVEAVV FVRRTQYSAD DDISSSDENF ESCSDQPLPE IEARVSDKEV LVRVHCEKTK 300 GCLAKILSEI ESLDLTIVNS SVLPFGNSTL DITVIAQMDA EFSMTVKDVV KNLRQSLLKF 360 V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 190 | 195 | ERKRRE |
2 | 191 | 196 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 8e-69 | bHLH family protein |