PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g123920.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 361aa    MW: 40357.3 Da    PI: 6.4488
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g123920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.3e-12185231455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h  +Er+RR+++ ++f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  Pd.00g123920.m01 185 DHVLAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKYVKHLQ 231
                       58899**********************.....9******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDMISSAKWV SDLEMEDPTF IHQYEMNSLD YSLDDLNFQS FSSESYSSDP NFTPKATHNF  60
SNASIETPHQ AGTHERPAKQ PKNHTTWNPC TTDHTFMAKA ASSSSSHLIS FDNSNSSPPT  120
SSHQFYGTLD NTMKPKNEVE YSNGKLNLTT LISQGSYDPQ TCSPRHGQGI KRAATVTRSP  180
LHAQDHVLAE RKRREKLSQR FIALSALVPG LKKMDKASVL GDAIKYVKHL QERTKMLEEQ  240
AVKKTVEAVV FVRRTQYSAD DDISSSDENF ESCSDQPLPE IEARVSDKEV LVRVHCEKTK  300
GCLAKILSEI ESLDLTIVNS SVLPFGNSTL DITVIAQMDA EFSMTVKDVV KNLRQSLLKF  360
V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195ERKRRE
2191196RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-69bHLH family protein