PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1238500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 24555.6 Da PI: 4.0968 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.3 | 3.7e-13 | 10 | 47 | 15 | 55 |
AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++AeIrdps+ + r++lg+f+taeeAa a+++a+++++g Pd.00g1238500.m01 10 YAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 47 89*****965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDDSLLARVY AAEIRDPSTK ERHWLGTFDT AEEAALAYDR AARSMRGSKA RTNFVYSDMP 60 HGSSVTSIIS PDESQHDMSA FFATPLQPQP QTTNHQQSFF TQDPFDAYPY SGGSSGGFGS 120 GSYGPVSGGD EPGSGSGSGS QSHTDLPPLP PCVSSTCYGP DGVMGSDMDM GYFGFSEHPT 180 NNGLDPMMSG SYMGFDSNEF VQHSPLFGSM PPVSDAGIDG FDLGSSSAYF Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28160.1 | 8e-26 | ERF family protein |