PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1237250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 122aa MW: 13707.3 Da PI: 9.7712 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.5 | 9e-15 | 2 | 44 | 10 | 55 |
AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +k+g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g Pd.00g1237250.m01 2 RKWGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 44 46**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MRKWGKWVAE IREPNKRSRI WLGSYTTPVA AARAYDTAVF YLRGPSARLN FPELVFQEDG 60 QQLHDMSAAS IRKKATEVGA KVDAVETAHR SPISQSKTTS SLVNSQKPDL NKYPDPENSD 120 EN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 2e-49 | ERF family protein |