PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1237170.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 361aa    MW: 39621.1 Da    PI: 6.0525
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1237170.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.32.1e-16168214455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Pd.00g1237170.m02 168 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 214
                        6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MADLYGTAPD SEEISNILSQ LLHGHGSSAS SSSSCMPFKP TYTHLLHSSV APHHVTTSSE  60
VLISETRHED YHRFARSEDR RVVDGNSAAA VVESSSGFDF TDSGGYFQAE VKEGMESDAN  120
TSLKGRRISS ENDLVDFSYD SEGHDRSEVP LNTAPPRSLS KRSRAAEVHN MSEKRRRSRI  180
NEKMKALQNL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML TMKNGLSLHP MCLPGVMQPM  240
QLPHMGLGLE EGSNKFPKSS RGISPFNENE DNPMQSAFNI SPGCAISNQP MVLPSVANVP  300
TSEATFGFEP SIQALYRPFS VPSSSKELFR DGEPQAKLDT SETGKNSSSH VDILSTKRPD  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.18e-45bHLH family protein