PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1237170.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 362aa    MW: 39749.3 Da    PI: 6.1932
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1237170.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.32.1e-16169215455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Pd.00g1237170.m01 169 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 215
                        6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MADLYGTAPD SEEISNILSQ LLHGHGSSAS SSSSCMPFKP TYTHLLHSSV APHHVTTSSE  60
VLISETRHED YHRFARSEDR RVVDGNSAAA VVESSSGFDF TDSGGYFQAE VKEGMESDAN  120
TSLKGRRISS ENDLVDFSYD SEKGHDRSEV PLNTAPPRSL SKRSRAAEVH NMSEKRRRSR  180
INEKMKALQN LIPNSNKTDK ASMLDEAIEY LKQLQLQVQM LTMKNGLSLH PMCLPGVMQP  240
MQLPHMGLGL EEGSNKFPKS SRGISPFNEN EDNPMQSAFN ISPGCAISNQ PMVLPSVANV  300
PTSEATFGFE PSIQALYRPF SVPSSSKELF RDGEPQAKLD TSETGKNSSS HVDILSTKRP  360
DV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.19e-45bHLH family protein